I don’t think it will, the theme come only when installing. But you can also duplicate it from the backend → frontend theme or just duplicate that entire folder and edit the theme.yaml just to be safe.
Themes are not usually overwritten by the system unless they are installed using composer. In all other cases, an immediate copy is produced for customization.
If you require a theme that updates, it is recommended to install it via composer, then create a child theme that references it, which, including a .themelock file to hide and prevent changes to the parent theme which may be lost during an update.